BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013D06LP1|AL426511
(778 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig776 1442 0.0
>3x_Contig776
Length = 3521
Score = 1442 bits (727), Expect = 0.0
Identities = 734/735 (99%), Gaps = 1/735 (0%)
Strand = Plus / Plus
Query: 32 taataatactaacagacatttctttttttatcaatagccaactctactcaaagtgttcca 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taataatactaacagacatttctttttttatcaatagccaactctactcaaagtgttcca 60
Query: 92 tcttcttgttctatcaagtcagatgccactgcttcc-tctcaagctgatttggacagcta 150
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61 tcttcttgttctatcaagtcagatgccactgcttccctctcaagctgatttggacagcta 120
Query: 151 ctctggttgttctaccattgtcggtgacttggtcttgaccggtgacctagcttccgctgc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctctggttgttctaccattgtcggtgacttggtcttgaccggtgacctagcttccgctgc 180
Query: 211 cttggctggtgtcgaagaaattgacggttctttgacaattaagaatgccactcaaatgac 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttggctggtgtcgaagaaattgacggttctttgacaattaagaatgccactcaaatgac 240
Query: 271 ttctttctccgctgactctttgaagaagatctctgaaactttgactttgaatcaattgac 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttctttctccgctgactctttgaagaagatctctgaaactttgactttgaatcaattgac 300
Query: 331 tgtattggacaccgcttctttcggttctttggaagaggttgacaccatcagtttcgttac 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtattggacaccgcttctttcggttctttggaagaggttgacaccatcagtttcgttac 360
Query: 391 tttaccagctgtttccaatattatcactaagttgacttctgctaagcaaattaccattgc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttaccagctgtttccaatattatcactaagttgacttctgctaagcaaattaccattgc 420
Query: 451 tgacactgctttggaatctatcgctggtttcgaagatttagacgaaattgaagtcttcaa 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgacactgctttggaatctatcgctggtttcgaagatttagacgaaattgaagtcttcaa 480
Query: 511 tgtcaacaacaacaaaggtttagcttccattgactctaagttgaagcacgtgaagactgc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgtcaacaacaacaaaggtttagcttccattgactctaagttgaagcacgtgaagactgc 540
Query: 571 tttggaaattactttcaacggacaatctgctgaaatctctttcgacgaattagaatgggc 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttggaaattactttcaacggacaatctgctgaaatctctttcgacgaattagaatgggc 600
Query: 631 taacaacatcactttgagagatgtttccagtgcttctttcgctaagttgagtaacgttaa 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taacaacatcactttgagagatgtttccagtgcttctttcgctaagttgagtaacgttaa 660
Query: 691 cgcttccctaggtttcattaacaactccttgccatctattgacttgtccaccttggaaaa 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgcttccctaggtttcattaacaactccttgccatctattgacttgtccaccttggaaaa 720
Query: 751 gattggtggttcttt 765
|||||||||||||||
Sbjct: 721 gattggtggttcttt 735
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,111
Number of Sequences: 1807
Number of extensions: 16111
Number of successful extensions: 231
Number of sequences better than 1.0e-20: 1
length of query: 778
length of database: 10,358,551
effective HSP length: 16
effective length of query: 762
effective length of database: 10,329,639
effective search space: 7871184918
effective search space used: 7871184918
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)